CDS

Accession Number TCMCG023C25254
gbkey CDS
Protein Id PIN01979.1
Location join(38380..38644,39081..39169,40013..40049,40211..40272,40382..40495,40768..40872,40988..41086,42165..42321,42426..42528,43080..43125)
Organism Handroanthus impetiginosus
locus_tag CDL12_25511

Protein

Length 358aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA324125, BioSample:SAMN05195323
db_source NKXS01006134.1
Definition TFIIF-interacting CTD phosphatase, including NLI-interacting factor [Handroanthus impetiginosus]
Locus_tag CDL12_25511

EGGNOG-MAPPER Annotation

COG_category K
Description catalytic domain of ctd-like phosphatases
KEGG_TC 3.A.8.1
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
ko03029        [VIEW IN KEGG]
KEGG_ko ko:K17496        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004721        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005740        [VIEW IN EMBL-EBI]
GO:0005743        [VIEW IN EMBL-EBI]
GO:0005744        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006470        [VIEW IN EMBL-EBI]
GO:0006605        [VIEW IN EMBL-EBI]
GO:0006626        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006839        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007005        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016311        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016791        [VIEW IN EMBL-EBI]
GO:0017038        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019866        [VIEW IN EMBL-EBI]
GO:0030150        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031966        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042578        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044455        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044743        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0065002        [VIEW IN EMBL-EBI]
GO:0070585        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071806        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0072655        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098798        [VIEW IN EMBL-EBI]
GO:0098800        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1990542        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCTGCATTGATTCGAAATCGTTTGCGCTTGTATTCTGCTATTTGGAAGAATAATCGTCAGTTTTCCTCGAACGCCGCCACCGAACCTCCGAGAGAACCAATCGTCTCATCATCGGTCCTTGGGGATCAGACACCGCAGCCTCCAAGTGGTTCGCCAACTCCGCCGCCGGCATCCAAGGCGAAGAGTTCCTGGAGCTTTCTGAAGTACGGTCTCATTGCTGCTGTCACCGGTGGTATCGCCACCGCTGGCTATGCCACATATGCTTACTCATTGGACGAGATTGATCAGAAGACAAAGGTTTTTCGTGCATATGCAGATTACAATGTTGTGGATGATGCATCTTCCCTAGATAAATTTCAAGCTTACTTGCGTGTTGCTGCAGTGACAGTCCCTGCTAAGTTAGTGGAAATTTACCTTGATCTAAGGAGGTTAGCTGAAGAACATGTCAGGGGTTTTACTGAGCCGACATCAGATAAACTTCTTCCTGATTTGCACCCTTTGGAGCAGCATGTTTTTACCCTTGTTCTAGATCTAAATGAGACATTGATATATTCTGATTGGAAGCGTGAGCGAGGGTGGAGATCATTCAAGAGACCTGGTGTAGATGCTTTTCTGGAGCATTTGGCTCAATTTTATGAAATTGTAGTATATTCTGACCAATTAAGTATGTATGTCGATCCTGTTGTCGAAAGATTGGATACAAAACACTGTATCCGTTATAGGCTTTCACGGGGTGCAACAAGATATGTTGATGGCAAGCACTATAGGGACCTCTCAAAGCTGAATAGGGATCCTGCAAAGGTTATATACATTAGTGGTCATGCTCTGGAAAGTAGTCTTCAGCCTGAGAACTGCATTCCTATAAAACCATGGCAAGGCGAAGCAGATGACACAGCACTTCTAGATCTCATTCCGTTTCTTGAATATGTTGCTAAGCACAGACCAGCTGAAATTCGGAATGTTATAGCTTCATATCAAGGGCGAGATATTGCCAAAGAGTTCATTGAACGATCCAAAGAGCATCAAAGGCGGATGCAAGAACAAAAGCAGCAGGGTCGTTTTTGGAGACGATAG
Protein:  
MSALIRNRLRLYSAIWKNNRQFSSNAATEPPREPIVSSSVLGDQTPQPPSGSPTPPPASKAKSSWSFLKYGLIAAVTGGIATAGYATYAYSLDEIDQKTKVFRAYADYNVVDDASSLDKFQAYLRVAAVTVPAKLVEIYLDLRRLAEEHVRGFTEPTSDKLLPDLHPLEQHVFTLVLDLNETLIYSDWKRERGWRSFKRPGVDAFLEHLAQFYEIVVYSDQLSMYVDPVVERLDTKHCIRYRLSRGATRYVDGKHYRDLSKLNRDPAKVIYISGHALESSLQPENCIPIKPWQGEADDTALLDLIPFLEYVAKHRPAEIRNVIASYQGRDIAKEFIERSKEHQRRMQEQKQQGRFWRR